Publications

For a complete list of publications see:
ResearchGate

Mathias RA, Greco TM and Cristea IM (2015) Identification of SIRT4 protein interactions: Uncovering candidate acyl-modified mitochondrial substrates and enzymatic regulators, Methods Mol Biol., in press.

Gopal SK, Greening DW, Mathias RA, Ji H, Rai A, Chen M, Zhu HJ and Simpson RJ (2015) YBX1/YB-1 induces partial EMT and tumourigenicity through secretion of angiogenic factors into the extracellular microenvironment, Oncotarget., 6(15): 13718-30.

Mathias RA, Guise AJ and Cristea IM (2015) Post-translational modifications regulate class IIa histone deacetylase (HDAC) function in health and disease, Mol Cell Proteomics, 14(3): 456-70.

Greening DW, Gopal SK, Mathias RA, Liu L, Sheng J, Zhu HJ and Simpson RJ (2015) Emerging roles of exosomes during epithelial-mesenchymal transition and cancer progression, Sem Cell Dev Biol., 40: 60-71.

Mathias RA, Greco TM, Oberstein A, Budayeva HG, Chakrabarti R, Rowland EA, Kang Y, Shenk T and Cristea IM (2014) Sirtuin 4 is a lipoamidase regulating pyruvate dehydrogenase complex activity, Cell, 159(7):1615-25.

Guise AJ, Mathias RA, Rowland EA, Yu F and Cristea IM (2014) Probing phosphorylation-dependent protein interactions within functional domains of histone deacetylase 5 (HDAC5), Proteomics, 14(19): 2156-66.

Tauro BJ, Greening DW, Mathias RA, Mathivanan S, Ji H and Simpson RJ (2013) Two distinct populations of exosomes are released from LIM1863 colon carcinoma cell-derived organoids, Mol Cell Proteomics, 12(3): 587-98.

Tauro BJ*, Mathias RA*, Greening DW, Gopal SK, Ji H, Kapp EA, Coleman BM, Hill AF, Kusebauch U, Hallows JL, Shteynberg D, Moritz RL, Zhu HJ and Simpson RJ (2013) Oncogenic H-ras reprograms Madin-Darby canine kidney (MDCK) cell-derived exosomal proteins following epithelial-mesenchymal transition, Mol Cell Proteomics, 12(8): 2148-59.

Mathias RA, Gopal SK and Simpson RJ (2013) Contribution of cells undergoing epithelial-mesenchymal transition to the tumour microenvironment, J Proteomics, 78: 545-57.

Tauro BJ, Greening DW, Mathias RA, Ji H, Mathivavan S, Scott AM and Simpson RJ (2012) Comparison of ultracentrifugation, density gradient separation, and immunoaffinity capture methods for isolating human colon cancer cell line LIM1863-derived exosomes, Methods, 56(2): 293-304.

Mathias RA, Ji H and Simpson RJ (2012) Proteomic profiling of the epithelial-mesenchymal transition using 2D DIGE, Methods Mol Biol., 854: 269-86.

Lim JW, Mathias RA, Kapp EA, Layton MJ, Faux MC, Burgess AW, Ji H and Simpson RJ (2012) Restoration of full-length APC protein in SW480 colon cancer cells induces exosome-mediated secretion of DKK-4, Electrophoresis, 33(12): 1873-80.

Mathias RA, Chen YS, Goode RJ, Kapp EA, Mathivanan S, Moritz RL, Zhu HJ and Simpson RJ (2011) Tandem application of cationic colloidal silica and Triton X-114 for plasma membrane protein isolation and purification: towards developing an MDCK protein database, Proteomics, 11(7): 1238-53.

Mathias RA, Chen Y, Kapp EA, Greening DW, Mathivanan S and Simpson RJ (2011) Triton X-114 phase separation in the isolation and purification of mouse liver microsomal membrane proteins, Methods, 54(4): 396-406.

Ji H, Goode RJ, Vaillant F, Mathivanan S, Kapp EA, Mathias RA, Lindeman GJ, Visvader JE and Simpson RJ (2011) Proteomic profiling of secretome and adherent plasma membranes from distinct mammary epithelial cell subpopulations, Proteomics, 11(20): 4029-39.

Chen Y*, Mathias RA*, Mathivanan S, Kapp EA, Moritz RL, Zhu H and Simpson RJ (2011) Proteomic profiling of MDCK plasma membranes reveals Wnt-5a involvement during oncogenic H-Ras/TGF-β-mediated epithelial-mesenchymal transition, Mol Cell Proteomics, 10(2): M110.001131.

Bernhard OK, Mathias RA, Barnes TW and Simpson RJ (2011) A fluorescent microsphere-based method for assay of multiple analytes in plasma, Methods Mol Biol., 728: 195-206.

Mathias RA, Chen YS, Wang B, Ji H, Kapp EA, Moritz RL, Zhu HJ and Simpson RJ (2010) Extracellular remodelling during oncogenic Ras-induced epithelial-mesenchymal transition facilitates MDCK cell migration, J Proteome Res., 9(2): 1007-19.

* Equal first authors.